Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015933536.1_cds_XP_016479785.1_71293
CDS Infomation

[gene=LOC107801037] [db_xref=GeneID:107801037] [protein=aspartate aminotransferase, mitochondrial-like] [protein_id=XP_016479785.1] [location=complement(join(7598..7670,7782..7876,7978..8073,8588..8747,9390..9562,9636..9740,9867..9972,10118..10324,11773..11858,12210..12386))] [gbkey=CDS]
Sequence

ATGGCGATTCGAGCCGCGATTTCCGGTCGTTCCCTCAAGCATATTAGCTCGTCGGTCGGA
GCGCGATCTTTGTCGTCGTTGTGGCGAAACGTCGAGCCGGCTCCTAAAGATCCTATCCTT
GGCGTTACCGAAGCTTTCCTCGCCGATCCTACTCCCCATAAAGTCAATGTTGGCGTTGGA
GCTTACAGGGACGACAACGGAAAACCCGTGGTACTGGAGTGTGTCAGAGAAGCAGAGCGG
AGGATCGCTGGCAGTTTCAACATGGAATATCTTCCTATGGGAGGTAGTGTCAACATGATC
GAGGAGTCACTGAAGTTAGCCTATGGGGAGAACTCAGACTTGATAAAAGATAAGCGCATT
GCAGCAATTCAAGCTTTATCTGGGACTGGAGCATGCCGAATTTTTGCAGACTTCCAAAGG
CGCTTTTGTCCTGATTCACAGATTTATATTCCTGTTCCTACATGGTCTAATCATCATAAC
ATTTGGAGAGATGCTCATGTCCCTCAGAAAACGTATCATTATTATCATCCTGAAACAAAG
GGGTTGGACTTCACTGCACTGATGGATGATATAAAGAATGCCCCAAATGGATCATTCTTT
CTGCTTCATGCTTGTGCTCACAATCCTACTGGGGTGGATCCTACAGAGGAACAATGGAGG
GAGATCTCGCACCACTTCAAGGTGAAGGGACATTTTGCTTTCTTTGACATGGCCTATCAA
GGATTTGCTAGTGGGAATCCAGAGAAGGATGCTAAGGCAATCAGGATATTTCTTGAAGAT
GGTCATCCGATAGGATGTGCCCAATCATATGCAAAAAATATGGGACTATATGGCCAGAGA
GTTGGTTGCCTAAGTGTGGTTTGTGAGGATGAAAAGCAAGCAGTGGCAGTGAAAAGTCAG
TTGCAGCAACTTGCTAGGCCCATGTACAGTAATCCACCTGTTCATGGTGCGCTCGTTGTT
TCTACCATCCTTGGAGATCCAAACTTGAAAAAGCTATGGCTTGGGGAAGTGAAGGGCATG
GCTGATCGCATCATCGGGATGAGAACTGCTTTAAGAGAAAACCTTGAGAAGAAGGGCTCA
CCTCTATCGTGGGAGCACATAACCAATCAGATTGGCATGTTCTGCTATAGTGGGATGACA
CCCGAACAAGTTGACCGTTTGACAAAAGAGTATCACATCTACATGACTCGTAATGGTCGT
ATCAGTATGGCAGGAGTTACTACTGGAAATGTTGGTTACTTGGCAAACGCTATTCATGAG
GTTACCAAATCAGCTTAA

Peptide Sequence

PEP ID

XP_016479785.1
PEP Infomation

PREDICTED: aspartate aminotransferase, mitochondrial-like [Nicotiana tabacum]
Sequence

MAIRAAISGRSLKHISSSVGARSLSSLWRNVEPAPKDPILGVTEAFLADPTPHKVNVGVG
AYRDDNGKPVVLECVREAERRIAGSFNMEYLPMGGSVNMIEESLKLAYGENSDLIKDKRI
AAIQALSGTGACRIFADFQRRFCPDSQIYIPVPTWSNHHNIWRDAHVPQKTYHYYHPETK
GLDFTALMDDIKNAPNGSFFLLHACAHNPTGVDPTEEQWREISHHFKVKGHFAFFDMAYQ
GFASGNPEKDAKAIRIFLEDGHPIGCAQSYAKNMGLYGQRVGCLSVVCEDEKQAVAVKSQ
LQQLARPMYSNPPVHGALVVSTILGDPNLKKLWLGEVKGMADRIIGMRTALRENLEKKGS
PLSWEHITNQIGMFCYSGMTPEQVDRLTKEYHIYMTRNGRISMAGVTTGNVGYLANAIHE
VTKSA

Transcript Sequence

Gene sequence data has not been registered.